C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, BED domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190574 ZBED6-001 ENSMUSG00000102049 10090 - 1:133655879-133660885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000190574
Transcript ID Adipose Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000190574 5.901±2.59 3.129±0.00 2.821±0.00 2.640±0.77 1.956±0.67 4.544±0.73 5.237±1.16 3.550±0.00 1.316±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W2 CIL_0008W2_0002 VISTA 1:133249313-133850886
CIL_00096T CIL_00096T_0002 VISTA 1:133444227-134045719

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000495527 ZC3H11A-002 nonsense_mediated_decay Homo_sapiens 0 2106
ENST00000545588 ZC3H11A-201 protein_coding Homo_sapiens 0 1402
ENST00000550078 ZBED6-001 protein_coding Homo_sapiens 0 4228

Loading