C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7A, pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190579 Rpl7a-ps10-001 ENSMUSG00000101502 10090 + 9:97179179-97179976 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000190579
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000190579 0.172±0.09 0.040±0.01 0.225±0.14 0.141±0.08 0.046±0.00 0.096±0.05 0.062±0.02 0.050±0.00 0.054±0.01 0.203±0.11 0.131±0.13 0.044±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000004238 rpl7a-001 protein_coding Danio_rerio 0 582
ENSDART00000137988 rpl7a-002 retained_intron Danio_rerio 0 460
ENSDART00000132525 rpl7a-003 retained_intron Danio_rerio 0 377
ENSDART00000137409 rpl7a-004 retained_intron Danio_rerio 0 326
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 0 207
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 942
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 669
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 604
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 765
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 628
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 490
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 743
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 477
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 588
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 780
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 784
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 553
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 774
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 686
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 645
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 774
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 411
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 798
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 680
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 769
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 593
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 939
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 802
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 710
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 774
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 364
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 909
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 854
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 606
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 492
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 673
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 824
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 704
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 538
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 675
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 243
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 843
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 645
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 457
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 909

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