C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibronectin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190780 Fn1-008 ENSMUSG00000026193 10090 - 1:71585524-71653172 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000190780
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000190780 29.107±10.03 2.706±0.55 2.105±0.00 45.533±10.04 16.301±1.79 3.815±0.76 3.410±0.46 59.837±40.98 20.545±2.92 1.679±0.20 14.442±2.93 202.140±214.32 0.642±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MI CIL_0005MI_0002 CGP 1:71557150-71653200
CIL_0005MJ CIL_0005MJ_0002 CGP 1:71585520-72212307

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000023692 fn1b-201 protein_coding Danio_rerio 0 235
ENSDART00000103754 fn1b-003 retained_intron Danio_rerio 0 235
ENSDART00000103755 fn1b-001 protein_coding Danio_rerio 0 235
ENST00000323926 FN1-002 protein_coding Homo_sapiens 0 4246
ENST00000336916 FN1-003 protein_coding Homo_sapiens 0 5347
ENST00000354785 FN1-001 protein_coding Homo_sapiens 0 4246
ENST00000356005 FN1-013 protein_coding Homo_sapiens 0 6290
ENST00000357867 FN1-004 protein_coding Homo_sapiens 0 6290
ENST00000359671 FN1-201 protein_coding Homo_sapiens 0 5347
ENST00000421182 FN1-005 protein_coding Homo_sapiens 0 6529
ENST00000426059 FN1-014 protein_coding Homo_sapiens 0 2296
ENST00000432072 FN1-012 protein_coding Homo_sapiens 0 4246
ENST00000438981 FN1-026 protein_coding Homo_sapiens 0 857
ENST00000443816 FN1-009 protein_coding Homo_sapiens 0 6290
ENST00000446046 FN1-008 protein_coding Homo_sapiens 0 5347
ENST00000456923 FN1-011 protein_coding Homo_sapiens 0 2047
ENST00000460217 FN1-025 retained_intron Homo_sapiens 0 907
ENST00000461974 FN1-022 retained_intron Homo_sapiens 0 246
ENST00000485567 FN1-023 retained_intron Homo_sapiens 0 520
ENST00000492816 FN1-007 retained_intron Homo_sapiens 0 1325
ENST00000494446 FN1-017 retained_intron Homo_sapiens 0 603
ENST00000498719 FN1-010 retained_intron Homo_sapiens 0 571

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