C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 29605
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190800 RP23-19M11.3-001 ENSMUSG00000101938 10090 - 9:90734145-90734436 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JF CIL_0007JF_0002 UCNEbase 9:90313955-92046042
CIL_0008VT CIL_0008VT_0002 VISTA 9:90391309-90992525
CIL_00081P CIL_00081P_0002 VISTA 9:90392809-90993922
CIL_000999 CIL_000999_0002 VISTA 9:90400205-91001272
CIL_0008JR CIL_0008JR_0002 VISTA 9:90430670-91032594
CIL_0008PJ CIL_0008PJ_0002 VISTA 9:90439782-91041474
CIL_0008F2 CIL_0008F2_0002 VISTA 9:90533186-91135005
CIL_000841 CIL_000841_0002 VISTA 9:90602260-91205637

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274242 RPL37-001 protein_coding Homo_sapiens 0 226
ENST00000412884 RPL37P10-001 processed_pseudogene Homo_sapiens 0.00000000000002 82
ENST00000418887 AC015977.5-001 processed_pseudogene Homo_sapiens 6e-35 150
ENST00000432310 RPL37P1-001 processed_pseudogene Homo_sapiens 6e-30 134
ENST00000460682 RPL37P6-001 transcribed_processed_pseudogene Homo_sapiens 0 191
ENST00000464216 RPL37P6-002 processed_transcript Homo_sapiens 0 191
ENST00000472498 RPL37P2-001 processed_pseudogene Homo_sapiens 0 230
ENST00000492641 RPL37P23-001 processed_pseudogene Homo_sapiens 0 209
ENST00000504562 RPL37-007 processed_transcript Homo_sapiens 0 224
ENST00000507308 RPL37P25-001 processed_pseudogene Homo_sapiens 4e-21 104
ENST00000507642 RPL37-004 processed_transcript Homo_sapiens 6e-17 92
ENST00000509877 RPL37-002 protein_coding Homo_sapiens 9e-17 92
ENST00000511787 RPL37-005 processed_transcript Homo_sapiens 0.000000000006 75

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