C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | splicing factor 3b, subunit 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000191303  |
Sf3b1-002 |
ENSMUSG00000025982 |
10090 | - |
1:55012252-55027394  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007X7 | CIL_0007X7_0002 | VISTA | 1:54604981-55208576 |
| CIL_00042O | CIL_00042O_0003 | CGP | 1:54645340-55027481 |
| CIL_00042R | CIL_00042R_0003 | CGP | 1:54985169-55072702 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000335508
|
SF3B1-001 | protein_coding | Homo_sapiens | 0 | 710 |
|
ENST00000409915
|
SF3B1-005 | protein_coding | Homo_sapiens | 0 | 937 |
|
ENST00000414174
|
SF3B1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 337 |
|
ENST00000414963
|
SF3B1-014 | protein_coding | Homo_sapiens | 0 | 813 |
|
ENST00000470268
|
SF3B1-002 | retained_intron | Homo_sapiens | 3e-21 | 108 |
|
ENST00000482158
|
SF3B1-010 | retained_intron | Homo_sapiens | 1e-21 | 108 |
|
ENST00000487698
|
SF3B1-004 | protein_coding | Homo_sapiens | 0 | 710 |
