C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stromal antigen 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000191345 Stag1-017 ENSMUSG00000037286 10090 + 9:100955769-100959375 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000191345
Transcript ID Adrenal Ovary
ENSMUST00000191345 0.931±0.00 1.004±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C8 CIL_0001C8_0002 CGP 9:100552188-100959375
CIL_0000WP CIL_0000WP_0002 CGP 9:100597798-101034898

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236698 STAG1-002 protein_coding Homo_sapiens 0 1975
ENST00000383202 STAG1-001 protein_coding Homo_sapiens 0 1977
ENST00000434713 STAG1-201 protein_coding Homo_sapiens 0 1260
ENST00000471595 PCCB-002 protein_coding Homo_sapiens 0 1511
ENST00000478469 PCCB-006 protein_coding Homo_sapiens 0 1511
ENST00000483235 STAG1-003 nonsense_mediated_decay Homo_sapiens 0 1138

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