C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S27A, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000191424 RP24-388H6.1-001 ENSMUSG00000101501 10090 + 1:52522239-52522701 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000191424
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000191424 0.115±0.00 0.034±0.00 0.531±0.04 0.306±0.00 0.157±0.05 0.058±0.03 0.146±0.00 0.287±0.00 0.660±0.00 0.084±0.05 0.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RZ CIL_0002RZ_0002 CGP 1:52457294-52651919

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329806 RP11-558O12.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000402798 RP11-367G18.2-001 processed_pseudogene Homo_sapiens 0 381
ENST00000447672 RP11-28P17.3-001 processed_pseudogene Homo_sapiens 0 307
ENST00000452665 RP11-423E7.1-001 processed_pseudogene Homo_sapiens 1e-38 163
ENST00000453803 RPS27AP3-001 processed_pseudogene Homo_sapiens 0 316
ENST00000457576 RPS27AP2-001 processed_pseudogene Homo_sapiens 0 412
ENST00000477681 CTD-2015H6.2-001 processed_pseudogene Homo_sapiens 0 294
ENST00000492222 RP11-51O6.1-001 transcribed_processed_pseudogene Homo_sapiens 0 425
ENST00000498403 RP11-1070A24.1-001 processed_pseudogene Homo_sapiens 0 219
ENST00000591758 RP11-51O6.1-002 processed_transcript Homo_sapiens 0 425
ENST00000597285 CTD-3214H19.12-001 processed_pseudogene Homo_sapiens 0 272

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