C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN binding protein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000011619 RANBP9-001 ENSG00000010017 9606 - 6:13621498-13711564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000011619
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000011619 8.155±0.00 5.543±0.00 1.631±0.00 12.633±4.55 6.672±2.92 5.619±3.43 6.070±3.28 4.986±2.76 3.989±0.00 6.572±2.94 21.308±15.78 10.941±2.28 8.974±0.57 68.484±25.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MO CIL_0008MO_0001 VISTA 6:13058507-13660102
CIL_0003I9 CIL_0003I9_0001 CGP 6:13574529-13632739
CIL_0003IG CIL_0003IG_0001 CGP 6:13615327-13711564
CIL_0003IF CIL_0003IF_0001 CGP 6:13621498-13814568

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005875 TAS microtubule associated complex
GO:0006461 TAS protein complex assembly
GO:0007020 NAS microtubule nucleation
GO:0007411 TAS axon guidance
GO:0008536 TAS Ran GTPase binding
GO:0019899 IPI enzyme binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144326 Ranbp9-201 protein_coding Mus_musculus 0 4263
ENSMUST00000071926 Nol7-201 protein_coding Mus_musculus 0 222

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