C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000064724 CLDN11-001 ENSG00000013297 9606 + 3:170418865-170434099 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000064724
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000064724 28.923±0.00 2.817±0.00 112.857±0.00 2.805±0.00 9.258±0.00 1.678±0.00 3.390±0.00 1.379±0.00 9.569±0.00 24.603±14.93 1.966±1.05 97.302±35.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Z6 CIL_0002Z6_0001 CGP 3:170357678-170860380
CIL_0002Z5 CIL_0002Z5_0001 CGP 3:170418865-170860380

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0005923 ISS tight junction
GO:0007155 IEA cell adhesion
GO:0007283 IEA spermatogenesis
GO:0008366 IEA axon ensheathment
GO:0016021 IEA integral component of membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding
GO:0045178 IEA basal part of cell
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037912 Ssh2-001 protein_coding Mus_musculus 0.00000000000001 86
ENSMUST00000074912 2010012O05Rik-201 protein_coding Mus_musculus 0.00000007 64

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