Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	tensin 1
ENST00000171887	TNS1-001	ENSG00000079308	9606	-	2:217799789-217944128	protein_coding

Expression Patterns

Transcript ID	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000171887	25.110±0.00	3.489±0.00	4.294±4.09	66.277±54.86	91.912±0.00	42.927±33.89	10.425±9.45	78.841±0.00	16.865±0.00	9.861±0.00	13.015±10.90	5.757±0.00	29.402±26.82

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007WL	CIL_0007WL_0001	VISTA	2:217636448-218238840
CIL_0005MB	CIL_0005MB_0001	CGP	2:217799789-218090581

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003779	IEA	actin binding
GO:0005515	IPI:IEA	protein binding
GO:0005737	IEA	cytoplasm
GO:0005856	IEA	cytoskeleton
GO:0005925	IDA	focal adhesion
GO:0007044	IEA	cell-substrate junction assembly
GO:0010761	IEA	fibroblast migration
GO:0030055	IEA	cell-substrate junction
GO:0044822	IDA	poly(A) RNA binding

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000169786	Tns1-201	protein_coding	Mus_musculus	0	5579
ENSMUST00000185702	Tns1-020	protein_coding	Mus_musculus	0	5513
ENSMUST00000187584	Tns1-001	protein_coding	Mus_musculus	0	3129
ENSMUST00000191104	Tns1-008	protein_coding	Mus_musculus	0	3097
ENSMUST00000185331	Tns1-004	protein_coding	Mus_musculus	0	3066
ENSMUST00000187691	Tns1-007	protein_coding	Mus_musculus	0	2436
ENSMUST00000191264	Tns1-002	retained_intron	Mus_musculus	0	623
ENSMUST00000188942	Tns1-003	retained_intron	Mus_musculus	0	592
ENSMUST00000185264	Tns1-017	processed_transcript	Mus_musculus	0	499
ENSMUST00000191527	Tns1-019	retained_intron	Mus_musculus	0	499
ENSMUST00000185529	Tns1-018	processed_transcript	Mus_musculus	0	344

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