C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: osteopetrosis associated transmembrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000193322 OSTM1-001 ENSG00000081087 9606 - 6:108041409-108074737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000193322
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000193322 1.582±0.00 1.293±0.00 1.005±0.00 1.973±0.17 2.804±0.52 0.877±0.00 1.331±0.00 2.633±1.62 0.906±0.00 2.251±0.92 0.169±0.00 1.440±0.89 0.882±0.00 1.143±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KA CIL_0007KA_0001 UCNEbase 6:107632412-108443377
CIL_0008G4 CIL_0008G4_0001 VISTA 6:107814126-108415302
CIL_0009BP CIL_0009BP_0001 VISTA 6:107816039-108417248

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005765 TAS lysosomal membrane
GO:0005829 IEA cytosol
GO:0016021 IEA integral component of membrane
GO:0030316 IEA osteoclast differentiation
GO:0034220 TAS ion transmembrane transport
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040718 Ostm1-004 protein_coding Mus_musculus 0 789
ENSMUST00000144806 Ostm1-002 protein_coding Mus_musculus 0 405
ENSMUST00000105497 Ostm1-003 protein_coding Mus_musculus 0 388
ENSMUST00000154048 Ostm1-005 retained_intron Mus_musculus 0 193

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