C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GTPase activating protein, alpha subunit 2 (catalytic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000202677 RALGAPA2-008 ENSG00000188559 9606 - 20:20392767-20712488 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonKidneyMuscleOvaryTestisENST00000202677
Transcript ID Adrenal Bladder Colon Kidney Muscle Ovary Testis
ENST00000202677 1.476±0.00 2.484±0.00 3.009±0.00 3.131±0.00 1.944±0.00 4.798±0.00 0.891±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R6 CIL_0007R6_0001 VISTA 20:20192309-20793556
CIL_0001TW CIL_0001TW_0001 CGP 20:20368121-20712488
CIL_0007A2 CIL_0007A2_0002 CGP 20:20389552-21246622

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005488 IEA binding
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0017123 ISS Ral GTPase activator activity
GO:0032859 ISS activation of Ral GTPase activity
GO:0046982 ISS protein heterodimerization activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131824 Ralgapa2-007 protein_coding Mus_musculus 0 6798
ENSMUST00000149499 Ralgapa2-008 protein_coding Mus_musculus 0 5288
ENSMUST00000109986 Ralgapa2-001 protein_coding Mus_musculus 0 3853
ENSMUST00000146307 Ralgapa2-005 nonsense_mediated_decay Mus_musculus 0 3166
ENSMUST00000109982 Ralgapa2-003 retained_intron Mus_musculus 0 2942
ENSMUST00000135974 Ralgapa2-006 retained_intron Mus_musculus 0 2348
ENSMUST00000148784 Ralgapa2-004 retained_intron Mus_musculus 0 876
ENSMUST00000124709 Ralgapa2-009 retained_intron Mus_musculus 0 357
ENSMUST00000124583 Ralgapa2-002 processed_transcript Mus_musculus 0 220
ENSMUST00000085385 Ralgapa1-201 protein_coding Mus_musculus 1e-33 150
ENSMUST00000110687 Ralgapa1-202 protein_coding Mus_musculus 1e-33 150

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