C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 34
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000215574 CDC34-001 ENSG00000099804 9606 + 19:531712-542087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215574
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215574 20.776±0.00 10.052±0.00 0.566±0.00 12.265±2.27 14.349±9.75 29.484±21.32 15.589±12.59 12.893±9.51 28.004±0.00 31.139±28.60 32.614±26.76 25.287±15.55 55.273±5.00 93.457±30.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_0007DQ CIL_0007DQ_0001 CGP 19:507299-542092
CIL_0001FW CIL_0001FW_0001 CGP 19:531712-549924

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 NAS G1/S transition of mitotic cell cycle
GO:0000209 IDA protein polyubiquitination
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006270 NAS DNA replication initiation
GO:0006464 NAS cellular protein modification process
GO:0016567 IDA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043525 IEA positive regulation of neuron apoptotic process
GO:0043951 IDA negative regulation of cAMP-mediated signaling
GO:0070848 IEA response to growth factor
GO:0070936 IDA protein K48-linked ubiquitination
GO:0090261 IEA positive regulation of inclusion body assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020550 Cdc34-201 protein_coding Mus_musculus 0 1085
ENSMUST00000166603 Cdc34-202 protein_coding Mus_musculus 0 992
ENSMUST00000188741 Cdc34-ps-201 protein_coding Mus_musculus 0 845
ENSMUST00000021240 Cdc34-ps-001 protein_coding Mus_musculus 0 845

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