C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance complex component 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216122 MCM5-001 ENSG00000100297 9606 + 22:35400063-35425430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLungOvaryENST00000216122
Transcript ID Brain Breast Colon Heart Lung Ovary
ENST00000216122 0.178±0.00 1.205±0.00 0.445±0.00 0.497±0.00 1.584±0.00 1.955±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099W CIL_00099W_0001 VISTA 22:35286634-35891311
CIL_00094Q CIL_00094Q_0001 VISTA 22:35329925-35944605
CIL_0006NI CIL_0006NI_0002 CGP 22:35380361-35425430
CIL_0003GR CIL_0003GR_0001 CGP 22:35400063-35554001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006260 IEA:TAS DNA replication
GO:0006270 IEA DNA replication initiation
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0016020 IDA membrane
GO:0032508 IEA DNA duplex unwinding
GO:0042555 IDA MCM complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164309 Mcm5-201 protein_coding Mus_musculus 0 2654
ENSDART00000024316 mcm5-001 protein_coding Danio_rerio 0 933

Loading