C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216802 PSME2-001 ENSG00000100911 9606 - 14:24143365-24147221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartOvaryENST00000216802
Transcript ID Brain Heart Ovary
ENST00000216802 2.710±0.00 2.391±0.00 67.810±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K8 CIL_0001K8_0002 CGP 14:24138959-24147570
CIL_00031B CIL_00031B_0001 CGP 14:24143362-24160661

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000209 TAS protein polyubiquitination
GO:0000278 TAS mitotic cell cycle
GO:0000502 TAS proteasome complex
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006521 TAS regulation of cellular amino acid metabolic process
GO:0006915 TAS apoptotic process
GO:0006977 TAS DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008537 IEA proteasome activator complex
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042981 TAS regulation of apoptotic process
GO:0043066 TAS negative regulation of apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161807 Psme2-001 protein_coding Mus_musculus 0 1064
ENSMUST00000104958 Psme2b-001 protein_coding Mus_musculus 0 992
ENSMUST00000111378 Psme2-201 protein_coding Mus_musculus 0 933
ENSMUST00000181249 Gm7928-001 processed_pseudogene Mus_musculus 0 747
ENSMUST00000159687 Psme2-002 protein_coding Mus_musculus 0 599
ENSMUST00000161573 Psme2-008 retained_intron Mus_musculus 0 573
ENSMUST00000161027 Psme2-007 retained_intron Mus_musculus 0 571
ENSMUST00000162700 Psme2-009 retained_intron Mus_musculus 0 416
ENSMUST00000159282 Psme2-006 retained_intron Mus_musculus 0 374
ENSMUST00000162496 Psme2-003 retained_intron Mus_musculus 5e-22 110
ENSMUST00000159845 Psme2-004 retained_intron Mus_musculus 0.000000000001 79

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