C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenylate kinase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000217893 AK6-003 ENSG00000273841 9606 - 5:69364745-69369642 protein_coding

Homo sapiens EnsemblGRCh38

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217893
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217893 31.896±0.00 20.664±0.00 3.666±0.00 16.161±6.37 10.460±2.12 18.892±0.00 20.242±0.00 9.734±3.12 7.996±4.44 8.076±1.98 6.552±4.08 19.330±10.91 17.031±2.45 44.543±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000125 IDA PCAF complex
GO:0002039 IPI p53 binding
GO:0003677 IDA DNA binding
GO:0003713 IMP transcription coactivator activity
GO:0004402 IDA histone acetyltransferase activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005669 IDA transcription factor TFIID complex
GO:0006325 TAS chromatin organization
GO:0006352 IEA DNA-templated transcription, initiation
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006368 TAS transcription elongation from RNA polymerase II promoter
GO:0006974 IC cellular response to DNA damage stimulus
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0030307 IMP positive regulation of cell growth
GO:0030914 IDA STAGA complex
GO:0032435 IDA negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0033276 IDA transcription factor TFTC complex
GO:0033613 IPI activating transcription factor binding
GO:0043066 IMP negative regulation of apoptotic process
GO:0043966 IDA histone H3 acetylation
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0050821 IDA protein stabilization
GO:0060760 IMP positive regulation of response to cytokine stimulus
GO:0070555 IMP response to interleukin-1
GO:0070742 IPI C2H2 zinc finger domain binding
GO:0070761 IDA pre-snoRNP complex
GO:0071339 IDA MLL1 complex
GO:1902166 IC negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084721 Ak6-201 protein_coding Mus_musculus 0 1280
ENSMUST00000190729 Ak6-002 protein_coding Mus_musculus 0 1280
ENSMUST00000167256 Taf9-201 protein_coding Mus_musculus 0 1243
ENSMUST00000190594 Taf9-001 protein_coding Mus_musculus 0 1120
ENSMUST00000121654 Gm12372-001 processed_pseudogene Mus_musculus 0 1003
ENSMUST00000119165 Gm14335-001 processed_pseudogene Mus_musculus 0 970
ENSMUST00000190165 Taf9-002 protein_coding Mus_musculus 0 918
ENSMUST00000187792 Taf9-004 protein_coding Mus_musculus 0 870
ENSMUST00000185767 Taf9-003 protein_coding Mus_musculus 0 819
ENSMUST00000113495 Taf9b-002 protein_coding Mus_musculus 0 448
ENSMUST00000055497 Taf9b-001 protein_coding Mus_musculus 0 448
ENSMUST00000185901 Ak6-003 retained_intron Mus_musculus 3e-39 167
ENSMUST00000022135 Ak6-001 protein_coding Mus_musculus 3e-39 167
ENSMUST00000190210 Ak6-004 retained_intron Mus_musculus 4e-28 130

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