C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fatty acid 2-hydroxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000219368 FA2H-001 ENSG00000103089 9606 - 16:74712955-74774825 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000219368
Transcript ID Bladder Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000219368 0.128±0.00 10.057±7.81 0.728±0.17 0.238±0.00 3.541±0.00 1.231±0.00 0.017±0.00 2.404±2.33 1.595±0.48 1.759±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000168 CIL_000168_0001 CGP 16:74671855-74774831
CIL_0002PJ CIL_0002PJ_0001 CGP 16:74712955-75000173

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001949 IEA sebaceous gland cell differentiation
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0006631 IEA fatty acid metabolic process
GO:0006633 IEA fatty acid biosynthetic process
GO:0006665 IEA sphingolipid metabolic process
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0020037 IEA heme binding
GO:0030258 IEA lipid modification
GO:0032286 IEA central nervous system myelin maintenance
GO:0032287 IEA peripheral nervous system myelin maintenance
GO:0042127 IEA regulation of cell proliferation
GO:0042634 IEA regulation of hair cycle
GO:0055114 IEA oxidation-reduction process
GO:0080132 IEA fatty acid alpha-hydroxylase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038475 Fa2h-001 protein_coding Mus_musculus 0 1234
ENSMUST00000162463 Fa2h-002 retained_intron Mus_musculus 0 1110
ENSMUST00000159336 Fa2h-003 processed_transcript Mus_musculus 0 514

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