C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid, veinlet-like 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000219551 RHBDL1-001 ENSG00000103269 9606 + 16:676075-678268 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyOvaryPlacentaTestisENST00000219551
Transcript ID Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000219551 1.804±1.03 0.160±0.00 0.114±0.00 0.196±0.00 0.485±0.18 0.219±0.06 0.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GN CIL_0003GN_0001 CGP 16:668086-678268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IEA serine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005887 TAS integral component of plasma membrane
GO:0006508 IEA proteolysis
GO:0007165 TAS signal transduction
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026831 Rhbdl1-001 protein_coding Mus_musculus 0 1423
ENSMUST00000183929 Rhbdl1-003 protein_coding Mus_musculus 0 1245
ENSMUST00000176751 Gm20683-001 nonsense_mediated_decay Mus_musculus 0 1090
ENSMUST00000184865 Rhbdl1-002 protein_coding Mus_musculus 0 459

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