C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurocalcin delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000220931 NCALD-003 ENSG00000104490 9606 - 8:101686727-101790961 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000220931
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000220931 2.661±0.00 4.378±0.00 0.993±0.00 29.818±11.87 9.308±0.00 3.588±2.86 1.668±0.72 1.730±1.28 3.337±1.02 3.137±0.06 0.910±0.67 5.561±6.78 2.156±0.62 2.724±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T4 CIL_0004T4_0002 CGP 8:101492432-102124907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005509 IEA calcium ion binding
GO:0005622 IDA intracellular
GO:0005829 NAS cytosol
GO:0007268 TAS synaptic transmission
GO:0015631 IDA tubulin binding
GO:0016192 NAS vesicle-mediated transport
GO:0030130 NAS clathrin coat of trans-Golgi network vesicle
GO:0030276 IDA clathrin binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119730 Ncald-003 protein_coding Mus_musculus 0 1184
ENSMUST00000120746 Ncald-002 protein_coding Mus_musculus 0 1146
ENSMUST00000168992 Ncald-201 protein_coding Mus_musculus 0 1144
ENSMUST00000090150 Ncald-001 protein_coding Mus_musculus 0 1144
ENSMUST00000116445 Ncald-010 protein_coding Mus_musculus 0 922
ENSMUST00000153775 Ncald-007 protein_coding Mus_musculus 0 765
ENSMUST00000148652 Ncald-005 protein_coding Mus_musculus 0 713
ENSMUST00000132423 Ncald-011 processed_transcript Mus_musculus 0 603
ENSMUST00000150453 Ncald-004 protein_coding Mus_musculus 0 427

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