C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000225296 DHX33-001 ENSG00000005100 9606 - 17:5440912-5469060 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060K CIL_00060K_0002 CGP 17:5419641-5448830
CIL_0000DD CIL_0000DD_0001 CGP 17:5432777-5469060
CIL_0000FL CIL_0000FL_0001 CGP 17:5440912-5486811

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000182 IDA rDNA binding
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0033613 IEA activating transcription factor binding
GO:0044822 IDA poly(A) RNA binding
GO:0045943 IDA positive regulation of transcription from RNA polymerase I promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108527 Dhx33-001 protein_coding Mus_musculus 0 2728
ENSMUST00000049048 Dhx33-008 nonsense_mediated_decay Mus_musculus 0 2261
ENSMUST00000124464 Dhx33-003 protein_coding Mus_musculus 0 1279
ENSMUST00000123860 Dhx33-004 processed_transcript Mus_musculus 0 846
ENSMUST00000146203 Dhx33-002 nonsense_mediated_decay Mus_musculus 0 741
ENSMUST00000155044 Dhx33-006 nonsense_mediated_decay Mus_musculus 0 549
ENSMUST00000178218 Dhx33-005 retained_intron Mus_musculus 0 473
ENSMUST00000178111 Dhx33-007 retained_intron Mus_musculus 0 335
ENSMUST00000179635 Dhx33-009 retained_intron Mus_musculus 0 235

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