C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyridoxamine 5'-phosphate oxidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000225573 PNPO-001 ENSG00000108439 9606 + 17:47941571-47948288 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000225573
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000225573 2.459±0.00 3.931±0.00 3.031±0.00 4.035±0.00 2.204±0.00 5.299±0.00 3.216±0.00 3.549±1.04 2.198±0.00 4.817±0.00 4.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_00097B CIL_00097B_0001 VISTA 17:47849190-48450331
CIL_0004N0 CIL_0004N0_0002 CGP 17:47941506-47957878

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004733 TAS:IEA pyridoxamine-phosphate oxidase activity
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0008615 IEA pyridoxine biosynthetic process
GO:0010181 IEA FMN binding
GO:0016491 IEA oxidoreductase activity
GO:0016638 IEA oxidoreductase activity, acting on the CH-NH2 group of donors
GO:0042816 TAS vitamin B6 metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018803 Pnpo-001 protein_coding Mus_musculus 0 1011
ENSMUST00000153896 Pnpo-002 processed_transcript Mus_musculus 0 556
ENSMUST00000107629 Pnpo-003 protein_coding Mus_musculus 0 257

Loading