C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS, dexamethasone-induced 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000225688 RASD1-001 ENSG00000108551 9606 - 17:17494437-17496393 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000225688
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000225688 55.381±0.00 23.274±0.00 5.548±0.00 33.579±26.63 25.292±21.15 10.257±9.58 7.499±6.96 72.419±0.00 7.738±6.75 9.291±8.46 9.942±7.08 21.648±29.50 3.432±2.76 31.196±26.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0001 VISTA 17:17235872-17840873
CIL_0000NV CIL_0000NV_0001 CGP 17:17476986-17496395
CIL_0000NN CIL_0000NN_0001 CGP 17:17494437-17591708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS:IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 TAS:IEA signal transduction
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0007263 IEA nitric oxide mediated signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062405 Rasd1-001 protein_coding Mus_musculus 0 1092

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