C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: recoverin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000226193 RCVRN-001 ENSG00000109047 9606 - 17:9896320-9905621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000226193
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000226193 0.010±0.00 0.112±0.02 0.037±0.01 0.172±0.00 0.020±0.00 0.060±0.00 0.017±0.00 0.039±0.01 0.035±0.00 0.045±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HG CIL_0000HG_0001 CGP 17:9822206-9905621
CIL_0005YU CIL_0005YU_0002 CGP 17:9896320-10198551

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007165 TAS signal transduction
GO:0007601 IEA visual perception
GO:0007602 IEA phototransduction
GO:0007603 TAS phototransduction, visible light
GO:0008048 TAS calcium sensitive guanylate cyclase activator activity
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0030425 IEA dendrite
GO:0031284 TAS positive regulation of guanylate cyclase activity
GO:0051924 IEA regulation of calcium ion transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021290 Rcvrn-001 protein_coding Mus_musculus 0 712

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