C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000227378 HSPA8-006 ENSG00000109971 9606 - 11:123057497-123061332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000227378
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000227378 57.568±0.00 43.376±0.00 97.991±0.00 62.106±0.00 151.146±0.00 133.602±0.00 271.073±0.00 111.599±0.00 161.379±0.00 96.178±0.00 137.816±49.57 216.729±77.87 85.215±29.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0000902 IEA cell morphogenesis
GO:0000974 IDA Prp19 complex
GO:0001664 IPI G-protein coupled receptor binding
GO:0005515 IPI protein binding
GO:0005524 IEA:IDA ATP binding
GO:0005615 IDA extracellular space
GO:0005622 NAS intracellular
GO:0005634 IDA nucleus
GO:0005681 IEA spliceosomal complex
GO:0005829 IDA cytosol
GO:0005886 TAS plasma membrane
GO:0005925 IDA focal adhesion
GO:0006200 IDA ATP catabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0006457 NAS protein folding
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0006986 NAS response to unfolded protein
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0007411 TAS axon guidance
GO:0008380 IEA RNA splicing
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0016887 IDA ATPase activity
GO:0019899 IPI enzyme binding
GO:0023026 IDA MHC class II protein complex binding
GO:0030529 IDA ribonucleoprotein complex
GO:0031072 IPI heat shock protein binding
GO:0031625 IPI ubiquitin protein ligase binding
GO:0042026 IDA protein refolding
GO:0042623 NAS ATPase activity, coupled
GO:0044822 IDA poly(A) RNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0051082 IDA unfolded protein binding
GO:0061024 TAS membrane organization
GO:0061202 TAS clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle
GO:1902904 IDA negative regulation of fibril organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 2488
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 2460
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 2180
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 2061
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 1908
ENSMUST00000190856 RP24-302H24.1-001 processed_pseudogene Mus_musculus 0 1674
ENSMUST00000122434 Gm13437-001 processed_pseudogene Mus_musculus 0 1576
ENSDART00000043743 HSPA8 (1 of 2)-001 protein_coding Danio_rerio 0 1467
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 0 1194
ENSMUST00000118350 Gm15604-001 processed_pseudogene Mus_musculus 0 1033
ENSMUST00000177767 Gm8355-201 processed_pseudogene Mus_musculus 0 926
ENSMUST00000120949 Gm9436-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000153847 Hspa8-006 processed_transcript Mus_musculus 0 893
ENSMUST00000140984 Hspa8-007 retained_intron Mus_musculus 0 737
ENSMUST00000127699 Hspa8-008 retained_intron Mus_musculus 0 475
ENSMUST00000133964 Hspa8-005 protein_coding Mus_musculus 0 425
ENSMUST00000117870 Hspa8-009 protein_coding Mus_musculus 0 383
ENSMUST00000138895 Hspa8-004 retained_intron Mus_musculus 0 348
ENSMUST00000121183 Gm13854-001 processed_pseudogene Mus_musculus 0 329

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