C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2/adenovirus E1B 19kDa interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000231668 BNIP1-002 ENSG00000113734 9606 + 5:173144442-173164340 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLungMuscleOvaryPlacentaENST00000231668
Transcript ID Adipose Brain Breast Colon Heart Lung Muscle Ovary Placenta
ENST00000231668 0.387±0.00 0.383±0.00 0.358±0.26 0.312±0.00 0.110±0.00 0.739±0.00 1.961±0.00 1.094±0.03 0.619±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000915 CIL_000915_0001 VISTA 5:172905793-173506594
CIL_0008HF CIL_0008HF_0001 VISTA 5:172963494-173565311
CIL_00023P CIL_00023P_0001 CGP 5:173056352-173164387
CIL_00023O CIL_00023O_0001 CGP 5:173144442-173235357

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005484 IDA SNAP receptor activity
GO:0005515 IPI protein binding
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005783 IDA endoplasmic reticulum
GO:0006914 IEA autophagy
GO:0006915 IPI apoptotic process
GO:0007029 IMP endoplasmic reticulum organization
GO:0016192 IEA vesicle-mediated transport
GO:0016320 IMP endoplasmic reticulum membrane fusion
GO:0030176 TAS integral component of endoplasmic reticulum membrane
GO:0031201 IDA SNARE complex
GO:0043066 TAS negative regulation of apoptotic process
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0097194 IC execution phase of apoptosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128461 Bnip1-002 retained_intron Mus_musculus 0 224
ENSMUST00000015725 Bnip1-001 protein_coding Mus_musculus 0 224
ENSMUST00000135824 Bnip1-009 protein_coding Mus_musculus 0 215
ENSMUST00000134344 Bnip1-005 nonsense_mediated_decay Mus_musculus 1.99993e-41 174
ENSMUST00000135899 Bnip1-003 retained_intron Mus_musculus 1e-28 132

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