C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein (G protein), beta polypeptide 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000232564 GNB4-001 ENSG00000114450 9606 - 3:179399202-179451590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000232564
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000232564 3.859±0.00 4.806±0.00 3.866±0.53 6.931±3.27 2.120±0.29 1.493±0.27 1.036±0.00 1.608±0.00 4.742±2.49 0.650±0.00 1.689±0.86 2.413±0.24 1.352±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FF CIL_0001FF_0001 CGP 3:179347692-179451590
CIL_0001FG CIL_0001FG_0001 CGP 3:179399202-179588408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0005765 IDA lysosomal membrane
GO:0005886 TAS plasma membrane
GO:0006112 TAS energy reserve metabolic process
GO:0007165 IEA signal transduction
GO:0008219 IEA cell death
GO:0021762 IEP substantia nigra development
GO:0032403 IDA protein complex binding
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome
GO:0071377 TAS cellular response to glucagon stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108234 Gnb4-002 protein_coding Mus_musculus 0 1090
ENSMUST00000155737 Gnb4-001 protein_coding Mus_musculus 0 1090
ENSMUST00000184130 Gnb4-005 nonsense_mediated_decay Mus_musculus 0 992
ENSMUST00000165335 Gnb1-201 protein_coding Mus_musculus 0 588
ENSMUST00000176637 Gnb1-008 protein_coding Mus_musculus 0 588
ENSMUST00000030940 Gnb1-001 protein_coding Mus_musculus 0 588
ENSMUST00000105616 Gnb1-004 protein_coding Mus_musculus 0 588
ENSMUST00000152901 Gnb4-003 retained_intron Mus_musculus 0 556
ENSMUST00000176308 Gnb1-007 retained_intron Mus_musculus 0 350
ENSMUST00000144292 Gnb4-004 retained_intron Mus_musculus 2e-20 106

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