C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000237612 ABCG2-001 ENSG00000118777 9606 - 4:88090269-88158912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000237612
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000237612 0.857±0.00 1.008±0.00 2.825±2.08 0.459±0.22 2.762±2.16 4.223±3.15 1.135±0.00 0.909±0.08 0.900±0.23 2.229±0.48 0.396±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RO CIL_0001RO_0002 CGP 4:88007668-88231322
CIL_0001RP CIL_0001RP_0002 CGP 4:88090264-88284769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0005886 TAS plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006810 TAS transport
GO:0006855 TAS drug transmembrane transport
GO:0006879 TAS cellular iron ion homeostasis
GO:0015232 TAS heme transporter activity
GO:0015886 TAS heme transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0042493 TAS response to drug
GO:0042626 TAS ATPase activity, coupled to transmembrane movement of substances
GO:0042803 IDA protein homodimerization activity
GO:0044281 TAS small molecule metabolic process
GO:0046415 IMP urate metabolic process
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114294 Abcg2-007 protein_coding Mus_musculus 0 1751
ENSMUST00000031822 Abcg2-001 protein_coding Mus_musculus 0 1751
ENSMUST00000143752 Abcg2-004 nonsense_mediated_decay Mus_musculus 0 1694
ENSMUST00000145161 Abcg2-008 protein_coding Mus_musculus 0 488
ENSMUST00000145685 Abcg2-010 nonsense_mediated_decay Mus_musculus 0 200

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