C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEK proto-oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000244776 DEK-002 ENSG00000124795 9606 - 6:18225470-18264541 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverENST00000244776
Transcript ID Breast Heart Liver
ENST00000244776 7.899±0.00 0.995±0.00 7.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090E CIL_00090E_0001 VISTA 6:17631749-18233261
CIL_0003RV CIL_0003RV_0001 CGP 6:18155329-18264823
CIL_00041Y CIL_00041Y_0001 CGP 6:18223868-18468874

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007165 TAS signal transduction
GO:0016568 IEA chromatin modification
GO:0019079 TAS viral genome replication
GO:0042393 IDA histone binding
GO:0044822 IDA poly(A) RNA binding
GO:2000779 IMP regulation of double-strand break repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021807 Dek-001 protein_coding Mus_musculus 0 1214
ENSMUST00000138401 Dek-003 processed_transcript Mus_musculus 0 756
ENSMUST00000129352 Dek-006 protein_coding Mus_musculus 0 691
ENSMUST00000135278 Dek-002 protein_coding Mus_musculus 0 460
ENSMUST00000143933 Dek-005 processed_transcript Mus_musculus 4e-38 163

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