C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DiGeorge syndrome critical region gene 6-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000248879 DGCR6L-001 ENSG00000128185 9606 - 22:20314276-20320080 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000248879
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000248879 11.141±0.00 18.006±0.00 1.935±0.00 6.875±4.93 7.641±6.66 6.769±4.79 4.837±4.16 10.232±4.38 10.649±9.88 4.883±3.82 8.312±3.35 13.176±7.90 24.664±3.66 71.560±32.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0001 VISTA 22:20120771-20724717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151266 Dgcr6-001 protein_coding Mus_musculus 0 691
ENSMUST00000066027 Dgcr6-006 protein_coding Mus_musculus 0 654
ENSMUST00000076757 Dgcr6-201 protein_coding Mus_musculus 0 566
ENSMUST00000143343 Dgcr6-002 protein_coding Mus_musculus 0 566
ENSMUST00000155387 Dgcr6-007 protein_coding Mus_musculus 0 527

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