C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 1, mu 2 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000250244 AP1M2-002 ENSG00000129354 9606 - 19:10572672-10587314 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLungOvaryPlacentaTestisENST00000250244
Transcript ID Bladder Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000250244 1.612±0.00 1.752±0.87 2.946±1.49 36.899±0.00 5.778±5.37 12.603±8.84 27.622±6.78 7.123±2.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000494 CIL_000494_0001 CGP 19:10566462-10587315
CIL_000491 CIL_000491_0001 CGP 19:10572671-10644559

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IEA protein binding
GO:0005765 TAS lysosomal membrane
GO:0005829 TAS cytosol
GO:0006605 TAS protein targeting
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0006903 TAS vesicle targeting
GO:0016032 TAS viral process
GO:0016192 IEA vesicle-mediated transport
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030131 IEA clathrin adaptor complex
GO:0030659 TAS cytoplasmic vesicle membrane
GO:0032588 TAS trans-Golgi network membrane
GO:0050690 TAS regulation of defense response to virus by virus
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003397 Ap1m2-201 protein_coding Mus_musculus 0 1504
ENSMUST00000115433 Ap1m2-202 protein_coding Mus_musculus 0 1476
ENSDART00000034505 ap1m2-001 protein_coding Danio_rerio 0 797
ENSDART00000125176 AP1M2 (1 of 2)-201 protein_coding Danio_rerio 0 791

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