C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, mannose-binding, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251047 LMAN1-001 ENSG00000074695 9606 - 18:59327823-59359962 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251047
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251047 16.275±0.00 3.232±0.00 6.706±0.00 3.417±1.46 9.826±0.08 10.572±2.34 8.183±2.48 18.471±4.16 15.445±7.87 12.073±3.00 6.282±2.73 10.645±3.25 16.969±7.56 9.908±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004H6 CIL_0004H6_0001 CGP 18:59275156-59359962
CIL_0001P5 CIL_0001P5_0001 CGP 18:59327823-59697380

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IPI protein binding
GO:0005537 TAS mannose binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0006457 TAS protein folding
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0007029 IEA endoplasmic reticulum organization
GO:0007030 IMP Golgi organization
GO:0007596 TAS blood coagulation
GO:0010638 IMP positive regulation of organelle organization
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030017 IEA sarcomere
GO:0030134 IEA ER to Golgi transport vesicle
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0051082 TAS unfolded protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120461 Lman1-002 protein_coding Mus_musculus 0 1744
ENSMUST00000048260 Lman1-001 protein_coding Mus_musculus 0 1600
ENSMUST00000143990 Lman1-003 protein_coding Mus_musculus 0 867
ENSMUST00000150133 Lman1-004 processed_transcript Mus_musculus 0 780

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