C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tudor domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251864 TDRD1-201 ENSG00000095627 9606 + 10:114179270-114232304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartLungMuscleOvaryPlacentaTestisENST00000251864
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Lung Muscle Ovary Placenta Testis
ENST00000251864 0.030±0.00 0.069±0.00 0.203±0.00 0.043±0.00 0.067±0.04 0.055±0.00 0.044±0.00 0.002±0.00 0.023±0.00 0.025±0.00 4.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OO CIL_0006OO_0001 CGP 10:114120862-114232304
CIL_0002OH CIL_0002OH_0001 CGP 10:114179270-114291513

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0007281 ISS germ cell development
GO:0007283 ISS spermatogenesis
GO:0030529 IEA ribonucleoprotein complex
GO:0031047 ISS gene silencing by RNA
GO:0033391 IEA chromatoid body
GO:0034587 ISS piRNA metabolic process
GO:0043046 ISS DNA methylation involved in gamete generation
GO:0043186 ISS P granule
GO:0046872 IEA metal ion binding
GO:0051321 IEA meiotic cell cycle
GO:0071546 ISS pi-body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111604 Tdrd1-004 protein_coding Mus_musculus 0 2037
ENSMUST00000078723 Tdrd1-003 protein_coding Mus_musculus 0 2037
ENSMUST00000111606 Tdrd1-002 protein_coding Mus_musculus 0 2037
ENSMUST00000121249 Tdrd1-001 protein_coding Mus_musculus 0 2037

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