C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DiGeorge syndrome critical region gene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252137 DGCR14-001 ENSG00000100056 9606 - 22:19130279-19144684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaENST00000252137
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta
ENST00000252137 0.514±0.00 0.369±0.05 0.162±0.00 0.738±0.00 0.217±0.02 0.364±0.08 0.188±0.06 0.580±0.54 0.356±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KV CIL_0003KV_0002 CGP 22:19036282-19144684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0003674 ND molecular_function
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0007399 ISS nervous system development
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003621 Dgcr14-201 protein_coding Mus_musculus 0 1567
ENSMUST00000055374 Tssk2-201 protein_coding Mus_musculus 0 1561
ENSMUST00000120451 Gm13332-001 processed_pseudogene Mus_musculus 0 1179
ENSMUST00000046937 Tssk1-201 protein_coding Mus_musculus 0 785

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