C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: D4, zinc and double PHD fingers family 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252268 DPF2-003 ENSG00000133884 9606 + 11:65333867-65352983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252268
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252268 15.487±0.00 13.890±0.00 9.798±6.72 6.614±5.68 2.776±0.00 13.633±0.00 5.824±4.15 4.373±0.62 12.867±0.00 16.485±0.00 13.456±7.29 10.776±1.34 19.946±3.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923
CIL_0003XD CIL_0003XD_0002 CGP 11:65314818-65353249

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0008270 IEA zinc ion binding
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118623 Dpf2-002 protein_coding Mus_musculus 0 1770
ENSMUST00000136983 Dpf2-001 protein_coding Mus_musculus 0 898
ENSMUST00000123029 Dpf2-005 retained_intron Mus_musculus 0 876
ENSMUST00000129816 Dpf2-007 retained_intron Mus_musculus 0 710
ENSMUST00000025746 Dpf2-009 nonsense_mediated_decay Mus_musculus 0 675
ENSMUST00000142995 Dpf2-006 retained_intron Mus_musculus 0 616
ENSMUST00000178756 Dpf3-203 protein_coding Mus_musculus 0 237
ENSMUST00000147469 Dpf3-001 protein_coding Mus_musculus 0 237
ENSMUST00000155937 Dpf2-003 processed_transcript Mus_musculus 3e-16 92

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