C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000253693 CAPN7-001 ENSG00000131375 9606 + 3:15206243-15252918 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253693 4.215±0.00 3.408±0.00 2.428±0.00 1.474±0.65 3.093±1.46 2.629±1.37 2.827±1.83 2.469±0.41 3.029±0.16 3.417±0.04 2.555±1.61 2.771±1.78 3.253±0.13 5.438±1.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EF CIL_0002EF_0002 CGP 3:15206152-15341368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IDA endopeptidase activity
GO:0004198 IBA:IEA calcium-dependent cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006508 IEA proteolysis
GO:0010634 IDA positive regulation of epithelial cell migration
GO:0070062 IDA extracellular vesicular exosome
GO:0090541 IPI MIT domain binding
GO:0097264 IDA self proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022451 Capn7-001 protein_coding Mus_musculus 0 3249
ENSMUST00000152182 Capn7-002 nonsense_mediated_decay Mus_musculus 0 1773
ENSMUST00000143472 Capn7-003 nonsense_mediated_decay Mus_musculus 0 1773

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