C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transport factor 2-like export factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254998 NXT1-001 ENSG00000132661 9606 + 20:23350736-23354777 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254998
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254998 7.378±0.00 20.689±0.00 0.334±0.00 2.207±2.00 5.027±2.79 5.749±5.37 1.996±1.53 3.603±2.84 2.225±1.91 9.167±8.55 2.756±2.20 18.928±10.20 15.933±4.57 14.296±2.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023I CIL_00023I_0001 CGP 20:23079349-23354777
CIL_00023L CIL_00023L_0001 CGP 20:23350736-23373063

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005643 IEA nuclear pore
GO:0005737 IEA cytoplasm
GO:0006405 IEA RNA export from nucleus
GO:0006611 IEA protein export from nucleus
GO:0006810 IEA transport
GO:0008536 IEA Ran GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109961 Nxt1-002 protein_coding Mus_musculus 0 682
ENSMUST00000047177 Nxt1-001 protein_coding Mus_musculus 0 682

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