C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing TCP1, subunit 7 (eta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258091 CCT7-001 ENSG00000135624 9606 + 2:73234238-73253004 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258091
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258091 58.304±0.00 54.380±0.00 1.659±0.00 41.530±13.61 30.108±13.85 46.922±33.33 34.563±27.01 38.715±24.76 14.803±4.32 35.204±27.98 44.528±28.47 71.186±28.16 64.832±39.93 64.958±16.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RW CIL_0008RW_0001 VISTA 2:72647671-73248640
CIL_0003EL CIL_0003EL_0001 CGP 2:73228006-73253021
CIL_0003EI CIL_0003EI_0001 CGP 2:73233420-73284431

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002199 IEA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 TAS cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0005832 IEA chaperonin-containing T-complex
GO:0005874 IDA microtubule
GO:0006457 IEA:TAS protein folding
GO:0007339 IEA binding of sperm to zona pellucida
GO:0042802 IEA identical protein binding
GO:0044267 TAS:IEA cellular protein metabolic process
GO:0044297 IEA cell body
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome
GO:1901998 IEA toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032078 Cct7-201 protein_coding Mus_musculus 0 2087
ENSDART00000006802 cct7-001 protein_coding Danio_rerio 0 1118
ENSMUST00000186367 RP23-191A12.1-001 processed_pseudogene Mus_musculus 0 769
ENSDART00000128363 cct7-003 processed_transcript Danio_rerio 0 569
ENSMUST00000120905 Gm12180-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000119296 Gm5380-001 processed_pseudogene Mus_musculus 0 292

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