C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynein, cytoplasmic 1, light intermediate chain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258198 DYNC1LI2-001 ENSG00000135720 9606 - 16:66720893-66751798 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258198
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258198 9.442±0.00 15.666±0.00 10.179±0.00 3.376±0.00 1.947±0.00 22.726±0.00 9.886±0.00 3.001±0.00 4.901±2.21 9.877±0.08 16.439±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0001 VISTA 16:66603173-67205657
CIL_0003LZ CIL_0003LZ_0002 CGP 16:66614750-66751798
CIL_0004IU CIL_0004IU_0001 CGP 16:66720893-66801620

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0003777 IEA microtubule motor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005868 IEA cytoplasmic dynein complex
GO:0005874 IEA microtubule
GO:0006810 IEA transport
GO:0007018 IEA microtubule-based movement
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0051642 IEA centrosome localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041769 Dync1li2-201 protein_coding Mus_musculus 0 2806

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