C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 41 (magnesium transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258538 SLC41A2-001 ENSG00000136052 9606 - 12:104802553-104928655 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258538
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258538 2.456±0.00 1.746±1.08 2.055±1.05 1.387±0.00 0.313±0.04 9.501±8.18 3.715±1.03 1.219±0.70 0.177±0.00 0.842±0.23 1.096±0.76 1.685±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TA CIL_0002TA_0001 CGP 12:104455295-104958744
CIL_0004GE CIL_0004GE_0001 CGP 12:104802553-105049737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006812 IEA cation transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039956 Slc41a2-001 protein_coding Mus_musculus 0 1895
ENSMUST00000154926 Slc41a2-004 protein_coding Mus_musculus 0 320
ENSMUST00000139329 Slc41a2-005 processed_transcript Mus_musculus 0 276
ENSMUST00000126617 Slc41a2-002 protein_coding Mus_musculus 0 250

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