C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258821 TTC5-001 ENSG00000136319 9606 - 14:20286228-20305994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000258821
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000258821 0.827±0.00 1.156±0.00 1.289±0.56 1.866±0.58 1.277±0.00 0.467±0.09 0.981±0.51 0.362±0.00 1.256±0.61 0.426±0.00 1.287±0.35 0.930±0.23 1.191±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q8 CIL_0005Q8_0001 CGP 14:20242739-20305994
CIL_0001OC CIL_0001OC_0001 CGP 14:20256558-20333312

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006451 Ttc5-201 protein_coding Mus_musculus 0 1478
ENSMUST00000098624 Gm9387-201 processed_pseudogene Mus_musculus 0 1389

Loading