C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000259006 LIMD2-001 ENSG00000136490 9606 - 17:63695902-63700140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverLungOvaryPlacentaENST00000259006
Transcript ID Adrenal Brain Colon Liver Lung Ovary Placenta
ENST00000259006 14.229±0.00 0.892±0.00 4.046±0.00 1.145±0.00 9.747±0.00 4.597±0.00 5.404±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0002QS CIL_0002QS_0001 CGP 17:63600872-63696303
CIL_0003AI CIL_0003AI_0002 CGP 17:63622415-63701172

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045923 Limd2-001 protein_coding Mus_musculus 0 658
ENSMUST00000106875 Limd2-002 protein_coding Mus_musculus 0 496
ENSMUST00000064545 Limd2-003 protein_coding Mus_musculus 0 496
ENSMUST00000138094 Limd2-004 processed_transcript Mus_musculus 0 486

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