C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 189
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000259395 ZNF189-003 ENSG00000136870 9606 + 9:101399028-101410660 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259395
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259395 2.108±0.00 0.782±0.00 1.261±0.95 1.272±0.96 0.540±0.11 0.950±0.01 1.062±0.00 1.062±0.49 0.645±0.10 3.327±1.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZX CIL_0001ZX_0001 CGP 9:101387633-101410660
CIL_0001ZW CIL_0001ZW_0001 CGP 9:101398873-101435823

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042964 Zfp189-002 protein_coding Mus_musculus 0 2252
ENSMUST00000107696 Zfp189-001 protein_coding Mus_musculus 0 2252
ENSMUST00000156218 Zfp938-002 nonsense_mediated_decay Mus_musculus 0.000001 60
ENSMUST00000041264 Zfp938-001 protein_coding Mus_musculus 0.000001 60

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