C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immediate early response 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000259874 IER3-001 ENSG00000137331 9606 - 6:30743199-30744554 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259874
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259874 11.482±0.00 47.899±0.00 6.501±0.00 6.117±3.39 19.226±7.35 15.990±14.32 5.321±3.63 27.259±27.02 17.260±10.67 87.470±83.56 3.346±0.26 98.926±98.59 47.315±3.52 18.391±13.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001562 IEA response to protozoan
GO:0003085 IEA negative regulation of systemic arterial blood pressure
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006282 IEA regulation of DNA repair
GO:0006915 TAS apoptotic process
GO:0007095 IEA mitotic G2 DNA damage checkpoint
GO:0008630 IEA intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009653 TAS anatomical structure morphogenesis
GO:0016021 IEA integral component of membrane
GO:0043066 IEA negative regulation of apoptotic process
GO:0045732 IEA positive regulation of protein catabolic process
GO:0045820 IEA negative regulation of glycolytic process
GO:0046822 IEA regulation of nucleocytoplasmic transport
GO:0050728 IEA negative regulation of inflammatory response
GO:1901029 IEA negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway
GO:2000377 IEA regulation of reactive oxygen species metabolic process
GO:2001020 IMP regulation of response to DNA damage stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003635 Ier3-001 protein_coding Mus_musculus 0 283

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