C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 8, member A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000259963 FAM8A1-001 ENSG00000137414 9606 + 6:17600355-17611719 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259963
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259963 10.141±0.00 2.980±0.00 4.027±0.00 10.193±2.89 5.711±3.23 8.091±2.52 3.726±2.04 11.226±1.77 7.804±4.42 6.861±1.53 4.253±2.54 7.935±2.57 3.822±0.57 9.277±4.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0001 VISTA 6:17172901-17774881
CIL_0008JF CIL_0008JF_0001 VISTA 6:17172919-17774874
CIL_0008B7 CIL_0008B7_0001 VISTA 6:17234961-17839440
CIL_0003RP CIL_0003RP_0001 CGP 6:17393216-17611719
CIL_00081D CIL_00081D_0001 VISTA 6:17414467-18016353
CIL_0003RM CIL_0003RM_0001 CGP 6:17600355-17706834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099547 C78339-001 protein_coding Mus_musculus 0 1138
ENSMUST00000150376 C78339-002 retained_intron Mus_musculus 0 366

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