C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WW domain binding protein 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261167 WBP11-001 ENSG00000084463 9606 - 12:14784579-14803540 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261167
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261167 8.165±0.00 8.985±0.00 2.613±0.00 6.691±2.38 3.906±1.87 3.835±1.57 3.937±2.71 4.511±2.38 1.848±1.54 3.931±2.67 5.676±3.24 14.761±15.48 6.134±5.92 21.333±6.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HB CIL_0003HB_0001 CGP 12:14774383-14803540
CIL_00036X CIL_00036X_0001 CGP 12:14784579-14906586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003697 TAS single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006364 IEA rRNA processing
GO:0006396 IEA RNA processing
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0008599 IEA protein phosphatase type 1 regulator activity
GO:0016607 IEA nuclear speck
GO:0044822 IDA poly(A) RNA binding
GO:0050699 IPI WW domain binding
GO:0050790 IEA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116514 Wbp11-001 protein_coding Mus_musculus 0 2758
ENSMUST00000151333 Wbp11-002 processed_transcript Mus_musculus 0 992
ENSMUST00000129078 Wbp11-005 processed_transcript Mus_musculus 6e-36 158

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