C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261489 TSC22D1-002 ENSG00000102804 9606 - 13:44432143-44436845 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000261489
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000261489 8.142±0.00 22.894±0.00 20.193±8.38 9.607±1.16 2.594±0.00 3.656±0.00 10.733±0.00 10.660±0.00 16.228±8.02 21.742±14.13 14.634±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MH CIL_0006MH_0002 CGP 13:44373665-44577147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022587 Tsc22d1-001 protein_coding Mus_musculus 0 1192
ENSMUST00000177207 Tsc22d1-005 protein_coding Mus_musculus 0 987
ENSMUST00000048371 Tsc22d1-002 protein_coding Mus_musculus 0 985
ENSMUST00000110888 Tsc22d1-006 protein_coding Mus_musculus 0 985
ENSMUST00000133224 Tsc22d1-008 protein_coding Mus_musculus 0 656
ENSMUST00000101618 Tsc22d1-003 protein_coding Mus_musculus 0 656
ENSMUST00000142683 Tsc22d1-004 protein_coding Mus_musculus 0 656
ENSMUST00000140251 Tsc22d1-016 protein_coding Mus_musculus 0 632
ENSMUST00000134109 Tsc22d1-007 protein_coding Mus_musculus 0 289

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