C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KIAA0556
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261588 KIAA0556-001 ENSG00000047578 9606 + 16:27550152-27780369 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000261588
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000261588 0.475±0.00 1.435±0.00 0.338±0.00 0.847±0.00 1.727±0.16 0.517±0.00 0.407±0.00 2.006±0.00 0.241±0.11 1.011±0.00 1.541±0.96 1.165±0.28 1.462±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FH CIL_0008FH_0001 VISTA 16:27337075-27938252
CIL_000435 CIL_000435_0001 CGP 16:27459555-27780369
CIL_0005TR CIL_0005TR_0001 CGP 16:27550133-28063509

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005886 IDA plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069660 D430042O09Rik-001 protein_coding Mus_musculus 0 3306
ENSMUST00000124223 D430042O09Rik-003 protein_coding Mus_musculus 0 1801
ENSMUST00000122337 D430042O09Rik-002 protein_coding Mus_musculus 0 1766
ENSMUST00000142464 D430042O09Rik-004 protein_coding Mus_musculus 0 392
ENSMUST00000132204 D430042O09Rik-007 protein_coding Mus_musculus 0 374
ENSMUST00000148701 D430042O09Rik-005 protein_coding Mus_musculus 0 339
ENSMUST00000155059 D430042O09Rik-006 retained_intron Mus_musculus 0 324

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