C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SECIS binding protein 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261847 SECISBP2L-004 ENSG00000138593 9606 - 15:48988770-49046433 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000261847
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000261847 2.471±0.00 7.859±4.70 1.593±0.68 2.874±0.71 2.059±0.00 1.982±0.00 0.806±0.00 0.407±0.00 1.122±0.00 1.205±0.64 1.473±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004N9 CIL_0004N9_0001 CGP 15:48877886-49046563
CIL_0002PL CIL_0002PL_0001 CGP 15:48988476-49155661

Gene Ontology

GO IDEvidence TypeGO Description
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053699 Secisbp2l-001 protein_coding Mus_musculus 0 2113
ENSMUST00000139944 Secisbp2l-002 protein_coding Mus_musculus 0 1397
ENSMUST00000136450 Secisbp2l-003 retained_intron Mus_musculus 0 213

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