C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif, single stranded interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262031 RBMS2-001 ENSG00000076067 9606 + 12:56521929-56596196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000262031
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000262031 19.332±0.00 1.171±0.00 1.574±0.98 4.256±0.00 1.658±0.00 0.890±0.00 4.253±0.00 8.250±0.00 0.885±0.52 4.632±1.75 9.539±0.00 4.527±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 TAS RNA binding
GO:0005634 IEA nucleus
GO:0006396 TAS RNA processing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092033 Rbms2-201 protein_coding Mus_musculus 0 990
ENSMUST00000099139 Rbms2-202 protein_coding Mus_musculus 0 883
ENSDART00000060059 rbms2b-001 protein_coding Danio_rerio 0 405
ENSMUST00000045621 Baz2a-201 protein_coding Mus_musculus 0 357
ENSMUST00000170054 Baz2a-202 protein_coding Mus_musculus 0 357
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000005 69
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000003 60

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