C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, type 2C, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262429 ATP2C2-001 ENSG00000064270 9606 + 16:84368527-84464178 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLungOvaryPlacentaENST00000262429
Transcript ID Bladder Breast Colon Kidney Lung Ovary Placenta
ENST00000262429 0.086±0.00 0.485±0.00 1.216±0.64 0.268±0.00 3.667±1.94 1.199±0.25 0.663±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IQ CIL_0007IQ_0001 CGP 16:84294646-84464187
CIL_000006 CIL_000006_0001 CGP 16:84368527-84554033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006816 IEA calcium ion transport
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0034220 TAS ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095171 Atp2c2-201 protein_coding Mus_musculus 0 2457

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